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Bioinformaticamente

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Tutorial

Genome Assembly – Tutorial

Date: 22 January 2021Author: bioinformaticamente 0 Comments

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We’re back! Finally it starts again!! I checked well. The last article was published in date April 24, 2021, I have not written anything for more than five months. It seemed like an infinite amount of time to me but I was so busy that dedicating myself to my divulgation activity would soon lead me to a total burn out. In this period of absence I dedicated myself to my thesis project, to the last exams and finally I graduated with great success, 110 cum laude.
What to ask to a sequence? Hello, how are you? I hope so. Today I am writing because I wanted to share with you some exercises that I usually try to do to practice as well as for pleasure. For example, sometimes I download a sequence on NCBI or recover this from the bioinformatics course that I followed during my master’s degree and almost for fun, I ask this what it has to tell me. No I’m not crazy, on the contrary I believe that one of the basic tasks of bioinformatics is precisely that of extracting information from the biological data at its disposal, so just as an investigator squeezes information from a questioned subject, I ask this sequence what it has to say. I think this is a useful exercise for many especially to train the tendency to ask the right question in front of a biological data. In fact, depending on the data, the question changes so to obtain correct information it is necessary to ask the right question, after all as Immanuel Kant said: “Before evaluating if an answer is correct, one must evaluate whether the question is correct.” READ MORE LINK IN BIO with VIDEO TUTORIAL!!! #bioinformaticamente #bioinformatics #bioinformaticslife #bioinformatica #computationalbiology #bio #computerscience #datascience #biology #sequence #ask #ask #database #getorf #orffinder #coding #codinglife #CDS #cosingsequence #dna #rna #protein #transcript #transcription #database #bioinfo
How to retrieve one or more biological sequences? One of the most frequent operations I do during the day is the search and recovery of biological sequences of interest. So I think it is necessary to talk to you about how this can be done, especially for novices, and therefore be able to “play” with some recovered genes or proteins. I remember that at the beginning of my bioinformatics studies I enjoyed recovering gene sequences and I was delighted to observe that multitude of letters (relating to the nitrogenous bases) that followed one another within the sequence. In short, obtaining a biological sequence of interest is a basic skill for a bioinformatician and with this article I will explain how to do it.
What is a gene? You know recently I have often sat in front of the computer intent on writing something more technical and therefore to present you more in-depth bioinformatics analyzes but I have always found myself in difficulty because I realize that sometimes to better understand a certain type of bioinformatics analysis it is also necessary to know some fundamental concepts of molecular biology. So the question I've always asked myself is: Should I first write something about basic concepts, such as what is a gene, before presenting some useful bioinformatics analysis? Well yes. I have chosen to talk to you about a topic that I think is a prerequisite for understanding what comes next and therefore some very useful bioinformatics analyzes. In particular, with this article I intend to explain what a gene is and what types of analyzes we can therefore perform when we have one of these in our "hands". READ MORE....LINK IN BIO #bioinformatics #biology #molecularbiology #molecular #dna #gene #genes #rna #mrna #rrna #trna #smallrna #promoter #cisactingelement #transelement #genome #bioinformaticslife #bio #computationalbiology #transcription #transcriptionfactors #rnapolimerase #polimerase #splicing #alternative #genestructure #orf #cds #sequence #bioinformaticamente

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